Pharmaceutical R&D Informatics

Drive Precision Medicine through the Digitalization of Pharma R&D

May 17 - 18, 2023 ALL TIMES EDT

The urgency surrounding generating, organizing, and analyzing data in the pharmaceutical industry has not waned. In fact, the desire to develop new technologies and speed development of infrastructure and special projects in our new normal continues to grow at record speed. The Pharmaceutical R&D Informatics track will explore key challenges and solutions around developing and scaling infrastructure, redefining knowledge management, organizing data generated via new technologies and services, and creating an effective and efficient informatics ecosystem while meeting scientific, business, and regulatory demands. We’ll explore the continued role FAIR data has in successful projects, strategies around developing analytics and visualization tools, and novel approaches utilizing AI, NLP, deep learning, and machine learning, and how these initiatives are driving innovation in R&D.

Monday, May 15

– 6:00 pm Hackathon*8:00 am

*Separate Complimentary Registration Required, see Hackathon page to submit your project OR register to participate

– 5:00 PM Registration Open – Come Early and Avoid the Lines2:00 pm

Tuesday, May 16

Registration Open7:00 am

Recommended Pre-Conference Workshops and Symposia*8:00 am

On Tuesday, May 16, 2023 Cambridge Healthtech Institute is pleased to offer nine pre-conference workshops scheduled across three time slots (8:00-10:00 am, 10:30 am-12:30 pm, and 1:45-3:45 pm) and two Symposia from 8:25 am-3:45 pm. All are designed to be instructional, interactive and provide in-depth information on a specific topic. They allow for one-on-one interaction and provide a great way to explain more technical aspects that would otherwise not be covered during the main conference tracks that take place Wednesday-Thursday.

*Separate registration required. For details, see Workshop agendas, FAIR Data Symposium agenda, and Knowledge Graphs Symposium agenda.

– 3:45 pm Hackathon*8:00 am

*Separate Complimentary Registration Required, see Hackathon page to submit your project OR register to participate

Refreshment Break and Transition to Plenary Keynote3:45 pm

PLENARY KEYNOTE PROGRAM

4:00 pm

Plenary Keynote Organizer's Remarks

Cindy Crowninshield, Executive Event Director, Cambridge Healthtech Institute

4:05 pm

Innovative Practices Awards

Joseph Cerro, Independent Consultant

Chris Dwan, Independent Consultant, Dwan, LLC

Allison Proffitt, Editorial Director, Bio-IT World

The Innovative Practices Awards recognizes and celebrates innovation that advances life sciences research. Bio-IT World is currently accepting entries for the 2023 Innovative Practices Awards, a competition designed to recognize partnerships and projects pushing our industry forward. Winners will be announced in mid-April 2023, recognized during the Tuesday May 16 Plenary Keynote Program, and scheduled to give a 30-minute podium presentation about their project during the conference. The deadline for entry is March 3, 2023. For more details about the Awards and to submit an application, visit the official Bio-IT World Innovative Practices Awards page: https://www.bio-itworld.com/Award/.

4:20 pm Plenary Keynote Introduction

David Gosalvez, PhD, Executive Director, Strategy & Informatics Portfolio, Revvity Signals

4:30 pm PLENARY KEYNOTE PRESENTATION:

The Promise of Data, Analytics, and Technology: Fueling Scientific and Medical Breakthroughs

Anastasia Christianson, PhD, Vice President, Global Head of AI, ML, Analytics, and Data, Pfizer Inc.

Edward Cox, Head & General Manager, Digital Health & Medicines (DHM), Pfizer Inc.

The 21st century has been referred to as the Century of Biology. With 90% of the world’s 97 zettabytes of data generated in the past 2 years and 30% of today’s data being healthcare related, how are we using data technology and advanced analytics (artificial intelligence, machine learning, and deep learning) to advance our understanding of disease and deliver “breakthroughs that change patients' lives?”

Welcome Reception in the Exhibit Hall with Poster Viewing5:45 pm

Close of Day7:00 pm

Wednesday, May 17

Registration and Morning Coffee7:00 am

PLENARY KEYNOTE PROGRAM

8:00 am

Plenary Keynote Organizer's Remarks

Allison Proffitt, Editorial Director, Bio-IT World

8:05 am PLENARY KEYNOTE INTRODUCTION:

Life Science Automation Opportunities – So Many Options, So Little Time

Santanu Sen, Vice President, Healthcare & Life Sciences, Virtusa

The COVID pandemic has demonstrated that therapies and vaccines can be developed in 18 months with a high degree of safety and efficacy. Pioneering work done by companies involved has shed light to archaic processes that have been in existence for decades with little need for change.  In this presentation, we will discuss collaborative efforts, enabling technologies, regulation, and workflow to automate these processes to advance personalized medicine initiatives.

8:15 am PLENARY KEYNOTE PRESENTATION:

Federated Futures: How the Largest Federated Learning Effort in Medicine Will Inform Our Next Steps

Spyridon Bakas, PhD, Assistant Professor, Radiology & Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania

Raymond Y. Huang, MD, PhD, Division Chief, Neuroradiology, Brigham and Women’s Hospital; Associate Professor of Radiology, Harvard Medical School

Jason Martin, Principal Engineer AI Research Science, Security Solutions Lab, Intel Labs

Is a federated learning model sufficient to handle data from 71 institutions and more than 6,000 patients located on six continents? Researchers from Penn Medicine and Intel Labs say yes. An interdisciplinary team created the largest to-date global federated learning effort to develop an accurate and generalizable machine learning model for detecting glioblastoma borders. We will share what we learned about creating and maintaining such a federation, how the software infrastructure evolved over the course of the study, and how this work will empower the future of high-quality, precision clinical care worldwide.

Coffee Break in the Exhibit Hall with Poster Viewing9:30 am

Organizer's Welcome Remarks10:15 am

FURTHERING DIGITAL TRANSFORMATION AS AN R&D STRATEGY: PROGRESS, ROADBLOCKS, NEXT STEPS

10:20 am

Chairperson's Remarks

Sean Liu, PhD, Global Head Scientific Assets & Decision Support, R&D IT, Takeda California, Inc.

10:25 am

Furthering the Digital Transformation Journey of Research at Regeneron

James Bonini, PhD, Senior Director, Scientific Business Analysis, R&pD-IT, Regeneron Pharmaceuticals, Inc.

The rapid pace of growth and scientific innovation in research and preclinical development at Regeneron has presented many interesting opportunities for digital transformation. This presentation will focus on our journey from capturing and connecting data in the labs to driving decisions and insights from the data for research leadership; including the current challenges, opportunities, successes, and strategies for continuing our journey going forward.

10:55 am

Digital Transformation in R&D Resulting in a Fundamental Change: An Effective Rollout of New Tools That Impact a Whole Research Organization

Monika Bug, Leader, pRED Data & Analytics, Roche

To take the next steps in digitalization and automation of lab workflows and to significantly boost drug discovery effectiveness while also catalyzing innovation, we at Roche Pharma Research and Early Development (pRED) have developed an application suite that allows all researchers to have all relevant information at their fingertips at any time. The challenges and success stories of rolling out such an application suite, fundamentally changing the ways of working for all pRED, will be shared in this talk to highlight the importance of collaboration and mindset when aiming for the next level of digital transformation.

11:25 am

Development Principles for Biotech Data Teams: Aligning Projects with Organizational Strategy

Jesse Johnson, PhD, formerly Head, Data Science and Data Engineering, Dewpoint Therapeutics

As a leader of a data team in a biotech organization, it isn't enough to build systems that will support your organization. You need to build an organization that can use those systems to become more than the sum of its parts. This talk will present twelve principles designed to guide leaders of Biotech Data teams to adopt more broadly scoped objectives, collaborate more effectively with wet lab teams, and align their development practices more closely with the organization’s needs. We’ll discuss how to define objectives and priorities to drive scientific discovery, how to structure communications to ensure effective information flow, and how to align and integrate technical development with experimental timelines.

11:55 am How Large Language Models will Change How We Do...Well, Just About Everything

Tim Smith, PhD, Sr. Director, AI Innovation, Takeda

Large Language Models (LLMs) like ChatGPT have dominated the news with promises of ushering in a whole new era of AI. Yet how to apply them to life sciences and applications that require accuracy and precision in a complex environment of specialized knowledge and nuance isn't clear. Hear how Takeda is putting generative LLMs to use with Sinequa’s Neural Search across the development lifecycle from initial drug discovery to regulatory submissions.

12:25 pm Accelerating Discovery Research with Artificial Intelligence & Machine Learning

Niranjani (Niran) Iyer, PhD, Scientist, Senior Industry Process Specialist, Dassault Systèmes

The high attrition rates for drug development is still a major challenge in this field.  Machine Learning (ML) and Artificial Intelligence (AI) are transforming scientific innovations, including drug discovery and development. This presentation will discuss BIOVIA solutions that empower scientists with ML and AI-driven tools for target identification, drug discovery, and drug repositioning. 

 

12:40 pm Connecting Chemistry with AI and Machine Learning: DMTA in the Lab of the Future

Tim Cheeseright, CEO, Torx

We present Torx, a web-based platform that drives collaboration and productivity in drug discovery by connecting teams and data across the entire Design-Make-Test-Analyze (DMTA) cycle. We explore how medicinal chemists use Torx to seamlessly access AI/ML predictive data in the context of all other relevant information, to ensure that only best candidates are selected, as well as communicate priorities and assignments clearly and securely to CROs to deliver results faster.

Session Break and Transition to Luncheon Presentation12:55 pm

1:05 pm LUNCHEON PRESENTATION:AI-driven Drug Discovery: Science-as-AI

Daniel Ferrante, PhD, Managing Director, Deloitte

AI models make inferences from raw data using sophisticated algorithms and reveals profound insights hiding in datasets, questioning what role society will play in developing scientific understanding. They are used for scientific processing & discovery - having success in learning complex data enabling novel modeling & data processing. The breadth of work at the intersection of AI & biological sciences is answering questions for both fields, particularly in Drug Discovery.

Refreshment Break in the Exhibit Hall with Poster Viewing1:50 pm

ANALYTICAL TOOLS FOR FURTHERING SCIENTIFIC DISCOVERY

2:35 pm

Chairperson's Remarks

Jesse Johnson, PhD, formerly Head, Data Science and Data Engineering, Dewpoint Therapeutics

2:40 pm

Developing and Utilizing Predictive Models to Determine Higher-Quality Drug Candidates

Anthony Rowe, PhD, Head, Technology - Global Scientific IT, Johnson & Johnson Technology

In this talk, we highlight the trends that are driving technology convergence and digital transformation in a drug discovery or development lab, including: the use of new therapeutic modalities; the adoption of lab-scale automation; the opportunities of high content assay approaches; and the deployment of ML & AI to a scientist's workflow. Before drilling down and exploring some of our current experiences in the ML & AI theme.

3:10 pm CO-PRESENTATION:

Digital Twin Lab Instruments: Automating the Pipeline

Martina Miteva, Director, Strategic Digital Initiatives, Research & Early Development IT, Bristol Myers Squibb Co.

Chris Willis, PhD, Associate Director, Research IT, Bristol Myers Squibb Co.

This talk will explore BMS's journey toward digital twin lab instruments, how we defined the model, mapped instance data, and ultimately automated the pipeline. We'll discuss the use cases of this digital twin, including monitoring the health of the instruments and moving towards a lab of the future.

3:40 pm

RNA-Binding Chemotypes: A Case Study in Data Exploration and Machine Learning

Kimberly Robasky, PhD, Associate Director of Machine Learning/AI, Arrakis Therapeutics

Modern harmonization technologies enable the integration of the multi-modal RNA-binding small molecule data that Arrakis and others have accumulated over the years for driving insights into drug candidates for currently undruggable genomic targets. We employ these data to empower state-of-the-art, emerging machine learning approaches to predicting RNA ligandable pockets for small molecule binding. Here we present the overall Arrakis platform alongside a data-engine case study focused on RNA-binding chemotypes (related to poster P04).

4:10 pm Into the Clinic: Transforming the Drug Discovery Process with Digital Chemistry

Erin Davis, PhD, Senior Vice President of Enterprise Informatics, Enterprise Informatics, Schrödinger

Duncan Hamish Wright, PhD, Vice President, Translational Science, Schrödinger's Therapeutics Group, Schrödinger

As predictive technologies and available data surge in volume, accelerating drug discovery becomes a cross-functional, decision-making enablement challenge. In this talk we outline the elements of a digital chemistry strategy in which a tightly coupled DMTA cycle is empowered by efficient exploration of billions of synthetically-feasible, project-relevant molecules using machine learning to amplify physics-based methods, delivered in a collaborative enterprise platform. We provide case studies from several successful drug discovery programs.

Best of Show Awards Reception in the Exhibit Hall with Poster Viewing4:40 pm

Close of Day6:00 pm

Thursday, May 18

Registration and Morning Coffee7:30 am

PLENARY KEYNOTE PROGRAM

8:00 am

Plenary Keynote Organizer's Remarks

Cindy Crowninshield, Executive Event Director, Cambridge Healthtech Institute

Plenary Keynote Sponsor Introduction (Opportunity Available)8:05 am

8:15 am PLENARY PANEL DISCUSSION:

Assessing Innovation: How Pharma Makes Tech Investment Decisions

PANEL MODERATOR:

Aaron Mann, CEO, Clinical Research Data Sharing Alliance

This panel session will assemble senior leaders who evaluate new technology adoption. We will hold an interactive discussion to help provide transparency in the evaluation and decision-making process for assessing and investing in new technologies. Themes we will cover include: 1) process for evaluating, piloting, and scaling new technologies and technology approaches; 2) how an organization evaluates an emerging technology vendor landscape; 3) when and how a formal buying process becomes required, and 4) identifying key stakeholders, decision-makers, and gatekeepers. 

PANELISTS:

April Bingham, Executive Director, Global Medical Compliance and Governance Chapter, Roche

Peter Mesenbrink, PhD, Executive Director, Biostatistics, Novartis Pharmaceuticals

Maria Palombini, Global Practice Leader, Healthcare & Life Sciences, IEEE Standards Association

Laszlo Vasko, Senior Director, Clinical Innovation R&D IT, Janssen Pharmaceuticals, Inc.

Coffee Break in the Exhibit Hall with Poster Viewing9:30 am

Organizer's Remarks10:15 am

BREAKING DOWN BARRIERS ACROSS THE R&D ORGANIZATION: NEW INFRASTRUCTURE AND TOOLS

10:20 am

Chairperson's Remarks

Tom Plasterer, PhD, Director, Bioinformatics, Data Science & AI, Biopharmaceutical R&D, AstraZeneca

10:25 am CO-PRESENTATION:

Building an Infrastructure to Capture, Register, and Visualize New Modalities

Peter Hillier, Senior Director, Discovery Automation Architect, Eli Lilly & Co.

DeAnna Zacherl, Executive Director, IT for BioTDR, Genetic Medicines, Neuroscience & Pain, Eli Lilly & Co.

Kai Zhao, Senior Advisor, Eli Lilly & Co.

Modern multi-modality drug discovery requires rethinking of IT infrastructure to move at the speed of science and enable scientific insights by giving researchers a comprehensive view across the organization and inclusive of all scientific evidence, both proprietary and in the public domain. We will present our experience in breaking down siloed systems to holistically capture relevant scientific data and give scientist data to drive innovation.

10:55 am

Scaling-Out Self-Service Activity Graphs across a Large Organization

Etzard Stolte, PhD, Global Head, Knowledge Management PTD, F. Hoffmann-La Roche

It is no easy feat to coordinate agile workflows across departments and systems, but it can be done with a combination of data services. This talk will discuss a global rollout of self-service analytical processes to a large global organization. We'll discuss data integration, document management, and infrastructure.

11:25 am CO-PRESENTATION:

The Cancer Genome Atlas Knowledge Graph

Helena Deus, Manager, Bioinformatics, ZS Associates

Tom Plasterer, PhD, Director, Bioinformatics, Data Science & AI, Biopharmaceutical R&D, AstraZeneca

The Cancer Genome Atlas (TCGA) is among the most impactful datasets in Oncology Research, used to better understand patients able to benefit from our novel therapies. To compare genomic features from TCGA with those derived from internal clinical studies, we transformed a subset of molecular data modalities into a knowledge graph with a common data model (an application ontology) to support multiple data products, from simple dashboards to sophisticated graph analytics.

11:55 am CENtree – Enterprise Ontology and Terminology Management for FAIR Data

Simon Jupp, Head of Semantic Technology, SciBite

There’s a pressing need for shared ontology and terminology standards in industries that are adopting a data-centric and FAIR approach to asset management. CENtree is an enterprise ontology management system developed by SciBite and provides a collaborative environment for creating, managing, and sharing ontologies via a user-friendly interface and API. This talk will discuss the motivation behind CENtree, its features, and best practices for managing ontologies.

12:25 pm PANEL DISCUSSION:

Pharma Knowledge Graphs and Large Language Models: Antagonistic or Synergistic?

PANEL MODERATOR:

Tom Plasterer, PhD, Director, Bioinformatics, Data Science & AI, Biopharmaceutical R&D, AstraZeneca

PANELISTS:

Benjamin R. Busby, PhD, Director, Solution Science, DNAnexus, Inc.

Mark Davies, Senior Vice President, Informatics and Data, Biomedical Informatics, BenevolentAI

Helena Deus, Manager, Bioinformatics, ZS Associates

Simon Jupp, Head of Semantic Technology, SciBite

Brian Martin, Head of AI, R&D Information Research, Research Fellow, AbbVie, Inc.

Session Break and Transition to Luncheon Presentation12:55 pm

1:05 pm LUNCHEON PRESENTATION:AIDDISON: Combining Artificial Intelligence, Machine Learning and CADD Tools into a System for Drug Discovery

Andrew Rusinko III, PhD, Solutions Scientist AIDDISON, MilliporeSigma

The widespread proliferation of Artificial Intelligence (AI) and Machine Learning (ML) methods are having a profound effect on the drug discovery process. However, many scientists are reluctant to utilize these powerful tools since there is a steep learning curve typically associated with them. AIDDISON™ was designed to provide a convenient, secure, web-based platform for drug discovery. 

Refreshment Break in the Exhibit Hall with Poster Viewing1:50 pm

ACCELERATING R&D THROUGH FAIR DATA INITIATIVES

2:35 pm

Chairperson's Remarks

Christopher Southan, PhD, Competitive Intelligence Analyst, Data Sciences, Medicines Discovery Catapult

2:40 pm

FAIR Data Accelerating R&D: Strategies and Best Practices

Soumya Singh, Senior Director, Integrated Data, Pharma R&D IT, Janssen R&D LLC

Globally over a million drug profiles are in development, and analyzing the research and development landscape across all therapeutic areas from discovery to launch can be challenging. Focusing on making data FAIR can accelerate drug development and support your strategic decision-making processes. This talk will highlight strategies and best practices.

3:10 pm

Drug Discovery Lead Compounds in Journals: Less FAIR than They Should Be?

Christopher Southan, PhD, Competitive Intelligence Analyst, Data Sciences, Medicines Discovery Catapult

The Journal of Medicinal Chemistry in PubMed was curated for the detection of new compound codes and lead molecules constituting the cutting edge of drug R&D. From 2000 abstracts, 260 codes were found which could be manually mapped to structures although code forms varied widely. While many had name-to-structure (n2s) matches in PubChem others were novel.  However, most leads remain difficult to map into databases because of trivial compound naming (e.g. compound 22b). Causes and amelioration of these FAIRness issues will be outlined.

3:40 pm CO-PRESENTATION:

Digitization & Contextualization of Drug Development Data 

Joshua Grou, Associate Scientist, Pharmaceutical Commercialization Technology, Merck & Co., Inc.

Ethan Holmgren, Associate Scientist, Pharmaceutical Commercialization Technology, Merck & Co., Inc.

Robert Meyer, Senior Principal Scientist, Merck & Co., Inc.

Throughout the development cycle of a drug, scientific data can quickly become a disorganized sea of information. We have engineered a solution to ingest and contextualize data in a FAIR way and ultimately drive faster and more efficient results. We would like to present ideas from our work and inspire others to bring similar solutions to their data.

Close of Conference4:10 pm






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